Neuroblastoma · Transposable Elements · Functional Genomics

Neuroblastoma TE-Enhancer Atlas

A Comprehensive Resource for Transposable Element-Derived Enhancers in Neuroblastoma

Integrating H3K27ac ChIP-seq, STARR-seq, HiChIP, MYCN ChIP, and clinical prognostic data across 76 neuroblastoma samples.

Try:
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NB Samples
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TE-Enhancers
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Linked Genes
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TE Subfamilies

Distribution Overview

TE Class Distribution

Tier × TE Class

Enhancer Flow

Functional Validation

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STARR-seq Validated
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MYCN-Bound
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HiChIP Target Genes

Explore the Atlas

Browse & Search

Search by genomic region, gene name, or filter by tier, TE class, star score, MYCN binding, and more.

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5-Star Confidence

Each enhancer is scored across 5 evidence dimensions: Recurrence, STARR, HiChIP, MYCN, Prognostic.

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Prognosis Calculator

Calculate patient risk score from 30-gene signature. Validated in TARGET and SEQC cohorts.

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